Persistent spectral holes were burned into fluorescence spectra of per
ipheral and core antenna complexes of Synechococcus elongatus cells an
d thylakoid membranes at 4.2 K. The observed hole structure with antih
ole and phonon side-band hole is typical for non-photochemical mechani
sm. The zero-phonon holes are suggested to be broadened by fast energy
transfer. The comparison of peripheral and core antenna hole burned s
pectra is discussed together with the effect of the polyacrylamide gel
isolation procedure of the core complex. The results obtained on the
antenna complexes are compared with an in vitro reference system lacki
ng energy transfer.