We examined the genomic occurrence of the transposable element pogo in
over 120 strains of Drosophila melanogaster, from around the world an
d from different eras. All had multiple copies of a 2.1 kilobase (kb)
pogo element, and multiple copies of several size classes between 1.0
and 1.8 kb. There were differences between strains in intensities or p
resences of deletion-derivative size classes, suggesting current or re
cent mobility in the species. We were unable to find any pogo-hybridiz
ation in eight other species in the genus, in three, subgenera, or in
the related Scaptomyza pallida. The pogo element may be a 'middle-aged
' element in the genome of D. melanogaster, having entered the species
since its divergence from its sibling species, but long before the P
and hobo elements.