Yp. Kartavtsev et Aa. Soloviev, SPECSTAT - PC SOFTWARE FOR STATISTICAL-DATA ANALYSIS IN THE FIELD OF POPULATION-GENETICS, Genetica, 88(1), 1993, pp. 79-82
This set of applied programs, SPECSTAT, has been written in Turbo Pasc
al-5 and is adapted for an IBM compatible PC-XT/AT using MS-DOS. SPECS
TAT is a small software package (approximately 300K) which has high ef
ficacy when performing calculations. SPECSTAT provides some new comput
ational opportunities not provided by the existing statistical package
s for analyzing allozyme population genetic data. Furthermore, it is a
ble to carry out some simple transformations of quantitative traits (Q
T) and the genotypic data matrix. These transformations are convenient
for the investigation of QT and allele frequencies and for the analys
is of the correlations between QT and allozyme genotypic codes. From t
he vectors of genotypic codes for each sample, the following parameter
s are computed: i) the allele frequencies with standard errors (SE), i
i) chi-squared values of goodness-of-fit for die observed and expected
Hardy-Weinberg genotype frequencies and iii) H(o), H(s) and F(is) val
ues. The H(t), F(it), F(st), D(st)' and F(st)', statistics, chi-square
d values in the heterogeneity test of the predominant alleles, and G-s
tatistics of all-allelic heterogeneity among samples with Williams' co
rrection (Sokal & Rolf, 1981) are also available. Calculations are per
formed to produce single-locus and combined matrices of Nei's genetic
distances Dn and Dm (standard and minimal unbiased), and the matrix of
combined Kalabushkin's similarity metrics, which maximize small diffe
rences. Other computational opportunities are provided as well. Output
data are simple ASCII files and are organized in a compact mode which
can either be used directly for publication or used after minor chang
es in further calculations.