We have purified human thimet oligopeptidase to homogeneity from eryth
rocytes, and compared it with the enzyme from rat testis and chicken l
iver. An antiserum raised against rat thimet oligopeptidase also recog
nized the human and chicken enzymes, suggesting that the structure of
the enzyme has been strongly conserved in evolution. Consistent with t
his, the properties of the human enzyme were very similar to those for
the other species. Thus human thimet oligopeptidase also is a thiol-d
ependent metallo-oligopeptidase with M(r) about 75000. Specificity for
cleavage of a number of peptides was indistinguishable from that of t
he rat enzyme, but K(i) values for the four potent reversible inhibito
rs tested were lower. In discussing the results, we consider the deter
minants of the complex substrate specificity of thimet oligopeptidase.
We question whether substrates containing more than 17 amino acid res
idues are cleaved, as has been suggested. We also point out that the f
avourable location of a proline residue and a free C-terminus in the s
ubstrate may be as important as the hydrophobic residues in the P2, P1
and P3' positions that have been emphasized in the past.