Self-reactivity and autoimmunity are processes related to the breakage
of self-tolerance that can be distinguished by their different clinic
al outcome and are widely accepted corner-stones of immunology. The fi
nding that several potentially autoaggressive cells contribute to the
repertoire of healthy individuals has stimulated a great deal of exper
imental work aimed at understanding the mechanisms that prevent autoim
mune pathology. In this review we will consider the basic principles,
and our present knowledge of the rules that preside over the interplay
of the immune system with self-components. One viewpoint stresses the
importance of major histocompatibility complex (MHC) and non-MHC gene
s in determining genetic predisposition to develop autoimmune phenomen
a. At a different level there is a strong interest in understanding th
e mechanisms of processing and presentation of self antigens, especial
ly during ontogeny. Another topic of major interest concerns the inter
action between MHC genes and the T cell receptor (TcR) complex as well
as the identification of TcR V genes that are preferentially expresse
d by autoimmune T cells. All of these aspects are evaluated in the con
text of tolerance based on deletion and anergy. Finally we will propos
e a general model of autoimmunity based on the most recent findings co
ncerning the biological activity of exogenous superantigens.