OVERALL AND INTERNAL PROTEIN DYNAMICS IN SOLUTION STUDIED BY THE NONSELECTIVE PROTON RELAXATION

Citation
Ag. Krushelnitsky et Vd. Fedotov, OVERALL AND INTERNAL PROTEIN DYNAMICS IN SOLUTION STUDIED BY THE NONSELECTIVE PROTON RELAXATION, Journal of biomolecular structure & dynamics, 11(1), 1993, pp. 121-141
Citations number
43
Categorie Soggetti
Biophysics,Biology
ISSN journal
07391102
Volume
11
Issue
1
Year of publication
1993
Pages
121 - 141
Database
ISI
SICI code
0739-1102(1993)11:1<121:OAIPDI>2.0.ZU;2-V
Abstract
A new algorithm for the analysis of nonselective proton relaxation dat a in protein solution is presented. T1 and T2 of protein protons in ly sozyme and RNase solutions were measured at three resonance frequencie s - 11, 27 and 90 MHz. In addition we measured water T1 dispersions in lysozyme solutions over the frequency range of 10 kHz - 10 MHz on a f ield-cycling installation. It was found that the correlation function of protein Brownian tumbling as a whole is nonexponential: in addition to a component with the usual correlation time tau(t) it contained al so a component with a correlation time exceeding tau(t) by approximate ly an order of magnitude and with a small relative amplitude. The expe riment shows that the parameters of the slow component of the tumbling correlation function depend both on the concentration and on the pH o f the protein solution. To explain the results obtained one must take into account the interprotein electrostatic interactions in solution. All protein molecules in solution experience electrostatic torques fro m their neighbors and this gives rise to an anisotropy in the protein Brownian tumbling. The lifetime of this anisotropy is controlled by th e translational diffusion of proteins.