PHYSICAL LOCATION OF THE HUMAN-IMMUNOGLOBULIN LAMBDA-LIKE GENES, 14.1, 16.1, AND 16.2

Citation
Tr. Bauer et al., PHYSICAL LOCATION OF THE HUMAN-IMMUNOGLOBULIN LAMBDA-LIKE GENES, 14.1, 16.1, AND 16.2, Immunogenetics, 38(6), 1993, pp. 387-399
Citations number
60
Categorie Soggetti
Immunology,"Genetics & Heredity
Journal title
ISSN journal
00937711
Volume
38
Issue
6
Year of publication
1993
Pages
387 - 399
Database
ISI
SICI code
0093-7711(1993)38:6<387:PLOTHL>2.0.ZU;2-3
Abstract
The human immunoglobulin lambda-like (IGLL) genes, which are homologou s to the human immunoglobulin lambda (IGL) light chain genes, are expr essed only in pre-B cells and are involved in B cell development. Thre e IGLL genes, 14.1, 16.1, and 16.2 are present in humans as opposed to one, lambda5 (Igll), found in the mouse. To precisely map the locatio n of the human IGLL genes in relation to each other and to the human I GL gene locus, at 22q11.1-2, a somatic cell hybrid panel and pulsed fi eld gel electrophoresis (PFGE) were used. Hybridization with a lambda- like gene-specific DNA probe to somatic cell hybrids revealed that the se genes reside on 22q11.2 between the breakpoint cluster region (BCR) and the Ewing sarcoma breakpoint at 22q12 and that gene 161 was locat ed distal to genes 14.1 and 16.2. Gene 14.1 was found by PFGE to be pr oximal to 16.2 by at least 30 kilobases (kb). A 210 kb Not I fragment containing genes 14.1 and 16.2 is adjacent to a 400 kb Not I fragment containing the BCR locus, which is just distal to the IGL-C (IGL const ant region) genes. We have determined that the IGLL genes 14.1 and 16. 2 are approximately 670 kb and 690 to 830 kb distal, respectively, to the 3'-most IGL-C gene in the IGL gene locus, IGL-C7. We thus show the first physical linkage of the IGL and the IGLL genes, 14.1 and 16.2. We discuss the relevance of methylation patterns and CpG islands to ex pression, and the evolutionary significance of the IGLL gene duplicati ons. Consistent with the GenBank nomenclature, these human IGLL genes will be referred to as IGLL1 (14.1), IGLL2 (16.2), and IGLL3 (16.1), r eflecting their position on chromosome 22, as established by this repo rt.