Hs. Ro et al., SITE-DIRECTED MUTAGENESIS OF THE AMINO-ACID-RESIDUES IN BETA-STRAND-III [VAL(30)-VAL(36)] OF D-AMINO-ACID AMINOTRANSFERASE OF BACILLUS SP YM-1, FEBS letters, 398(2-3), 1996, pp. 141-145
The beta-strand III formed by amino acid residues Val(30)-Val(36) is l
ocated across the active site of the thermostable D-amino acid aminotr
ansferase (D-AAT) from thermophilic Bacillus sp, YM-1, and the odd-num
bered amino acids (Tyr(31), Val(33), Lys(35)) in the strand are reveal
ed to be directed toward the active site, Interestingly, Glu(32) is al
so directed toward the active site, We first investigated the involvem
ent of these amino acid residues in catalysis by alanine scanning muta
genesis. The Y31A and E32A mutant enzymes showed a marked decrease in
k(cat) value, retaining less than 1% of the wild-type enzyme activity,
The k(cat) values of V33A and K35A were changed slightly, but the K-m
of K35A for alpha-ketoglutarate was increased to 35.6 mM, compared to
the K-m value of 2.5 mM for the wild-type enzyme, These results sugge
sted that the positive charge at Lys(35) interacted electrostatically
with the negative charge at the side chain of cl-ketoglutarate, Site-d
irected mutagenesis of the Glu(32) residue was conducted to demonstrat
e the role of this residue in detail, From the kinetic and spectral ch
aracteristics of the Glu(32)-substituted enzymes, the Glu(32) residue
seemed to interact with the positive charge at the Schiff base formed
between the aldehyde group of pyridoxal 5'-phosphate (PLP) and the eps
ilon-amino group of the Lys(145) residue.