W. Linert et F. Renz, MODELING CRYSTAL-STRUCTURES BY NUMERICAL-METHODS - A TOOL FOR PRACTICAL STRUCTURE-ANALYSIS, Journal of chemical information and computer sciences, 33(5), 1993, pp. 776-781
Molecular mechanics calculations on crystals have been performed by us
ing a simplex optimization and a simulated annealing procedure. Empiri
cal Coulomb-Lennard-Jones potentials with an additional set of 10-12 p
otentials to describe hydrogen bond interactions were used to model cr
ystals (i) with periodic boundary conditions including the interaction
s of 27 unit cells and (ii) including 729 unit cells (called extended
neighbor model). The restrictions imposed by the respective space grou
p were taken into account. As test examples formamide, 1-dimethylethyl
)-2-hydroxycyclopentanecarboxamide, ,1-dimethylethyl)-2-hydroxy-cyclop
entanecarboxylic acid, and ,1-dimethylethyl)-2-hydroxy-cyclopentanecar
boxylic acid were used. Theoretically predicted structures are found t
o be in excellent agreement with the experimental structures, if exten
ded neighbor interactions are taken into account.