RNA was less studied by flow cytometry (FCM) in comparison to other ce
llular components. Moreover, most of these studies were applied to the
measurement of total RNA. Nevertheless, such a quantification, essent
ially by the use of acridine orange, but also other dyes or dye combin
ations, permitted the acquisition of important information about the g
eneral metabolism, and the characterization of different tumoral cell
types. More recently, FCM has been used to quantify specific mRNA, in
two different approaches: the first one employes the sorting followed
by RNA extraction and/or detection by specific radiolabeled probes; in
the second approach, the use of fluorescence in situ hybridization (F
ISH) on cells in suspension allowed the direct quantification of speci
fic mRNA by FCM.