Iditis: Protein structure database

Citation
S. Gardner et J. Thornton, Iditis: Protein structure database, ACT CRYST D, 54, 1998, pp. 1071-1077
Citations number
38
Categorie Soggetti
Chemistry & Analysis
Journal title
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
ISSN journal
09074449 → ACNP
Volume
54
Year of publication
1998
Part
6
Pages
1071 - 1077
Database
ISI
SICI code
0907-4449(19981101)54:S1<1071:IPSD>2.0.ZU;2-8
Abstract
The validation, enrichment and organization of the data stored in PDB files is essential for those data to be used accurately and efficiently for mode lling, experimental design and the determination of molecular interactions. The Iditis protein structure database has been designed to allow the wides t possible range of queries to be performed across all available protein st ructures. The Iditis database is the most comprehensive protein structure r esource currently available, and contains over 500 fields of information de scribing all publicly deposited protein structures. A custom-written databa se engine and graphical user interface provide a natural and simple environ ment for the construction of searches for complex sequence- and structure-b ased motifs. Extensions and specialized interfaces allow the data generated by the database to used in conjunction with a wide range of applications.