Halogens in aqueous solution are still used world-wide as disinfectants. Du
ring the process of halogenation, the substances present in water undergo s
everal chemical processes, yielding relatively unstable intermediate specie
s; their life-times in the medium depend on their structure and on the phys
ico-chemical conditions. Several low molecular weight hydrocarbons are form
ed during water halogenation, some of them potent mutagens and/or carcinoge
ns. Halogenation also takes place in vivo involving the system myeloperoxid
ase/H2O2/halide, which increases the relevance of such reactions and opens
new research fields.