Structural heterogeneity in the O polysaccharide of Pseudomonas syringae pv. coriandricola GSPB 2028 (NCPPB 3780, W-43)

Citation
Ya. Knirel et al., Structural heterogeneity in the O polysaccharide of Pseudomonas syringae pv. coriandricola GSPB 2028 (NCPPB 3780, W-43), EUR J BIOCH, 258(2), 1998, pp. 716-721
Citations number
20
Categorie Soggetti
Biochemistry & Biophysics
Journal title
EUROPEAN JOURNAL OF BIOCHEMISTRY
ISSN journal
00142956 → ACNP
Volume
258
Issue
2
Year of publication
1998
Pages
716 - 721
Database
ISI
SICI code
0014-2956(199812)258:2<716:SHITOP>2.0.ZU;2-0
Abstract
The O polysaccharide (OPS) of the lipopolysaccharide of Pseudomonas syringa e pv. coriandricola GSPB 2028 (NCPPB 3780, W-43) was studied by Smith degra dation and H-1-NMR and C-13-NMR spectroscopy, including two-dimensional COS Y, TOCSY, NOESY, and H-detected H-1, C-13 heteronuclear multiple-quantum co herence (HMQC) experiments. The OPS was shown to consist of pentasaccharide O repeats of two types both containing foul L-rhamnose and one 3-acetamido -3,6-dideoxy-D-galactose (D-Fuc3NAc) residue. Structure 1 of the major O re peat which had been established earlier [Das, S., Ramm, M., Kochanowski, H. & Basu, S. (1994) J. Bacteriol. 176, 6550-6557], was confirmed by our data , and a new structure 2 was elucidated for the minor O repeat and found to differ from the structure 1 only in the position of substitution of one of the rhamnose residues in the main chain. [GRAPHICS] A role of structural and immunochemical features of the LPS for defining th e taxonomical position of the bacterium studied is discussed.