An ab initio model system investigation of the proposed mechanism for activation of peroxidases: Cooperative catalytic contributions from the ion andmicrosolvent water

Authors
Citation
De. Woon et Gh. Loew, An ab initio model system investigation of the proposed mechanism for activation of peroxidases: Cooperative catalytic contributions from the ion andmicrosolvent water, J PHYS CH A, 102(50), 1998, pp. 10380-10384
Citations number
20
Categorie Soggetti
Physical Chemistry/Chemical Physics
Journal title
JOURNAL OF PHYSICAL CHEMISTRY A
ISSN journal
10895639 → ACNP
Volume
102
Issue
50
Year of publication
1998
Pages
10380 - 10384
Database
ISI
SICI code
1089-5639(199812)102:50<10380:AAIMSI>2.0.ZU;2-W
Abstract
In the enzymatic cycle of the peroxidase family of heme proteins, hydrogen peroxide is transformed into the catalytically active species, an Fe=O heme species known as compound I. The postulated mechanism involves the formati on of a transient HOOH-Fe heme complex that is transformed via proton trans fer to the oxywater isomer H2OO-Fe heme species, which is followed by facil e cleavage of the O-O bond to yield compound I and water. The proton transf er process is thought to be aided by a highly conserved distal histidine th at serves as a catalyst. The plausibility of this step has been assessed in this work by characterizing the isomerization of HOOH to H2OO in complexes with Fe+, Fe2+, Fe3+, Na+, Mg2+ and Al3+ using second- order perturbation theory and the coupled-cluster method in conjunction with various basis set s. The putative catalytic role of a proton acceptor was investigated by det ermining the influence of one microsolvent water on the Mg2+ system. The re sults demonstrate that although the gas-phase isomerization is highly endot hermic and possesses a large activation energy, the metal ion significantly stabilizes the oxywater isomer. The Na+ - Mg2+ - Al3+ sequence of complexe s reveals that the stabilization effect increases sharply with the charge o n the ion. Fe+ and Fe2+ calculations found a small amount of additional sta bilization with respect to the corresponding Na+ and Mg2+ systems. While th e barrier to isomerization was not significantly reduced by binding peroxid e to a cation alone, it was reduced dramatically when a single water was ad ded to the Mg2+ system. The ion contributes to this effect by increasing th e protonicity of the H that is being transferred, allowing it to interact m ore strongly with the water. The proton transfer is thus strongly enhanced by cooperative contributions by the metal ion and microsolvent water.