Phylogenetic studies are contributing greatly to our knowledge of relations
hips on both sides of the plant-bacteria nodulation symbiosis. Multiple ori
gins of nodulation (perhaps even within the legume family) appear likely. H
owever, all nodulating flowering plants are more closely related than previ
ously suspected, suggesting that the predisposition to nodulate might have
arisen only once. Phylogenies of 16S rRNA genes highlight the evolutionary
diversity of symbiotic bacteria and appear to rule out any broad coevolutio
n with their plant hosts, but high levels of gene transfer might obscure th
e relevant pattern. The origins of nodulation, and the extent to which deve
lopmental programs are conserved in nodules remain unclear, but an improved
understanding of the relationships between nodulin genes is providing some
clues.