Genomic organization and chromosomal localization of the Itm2a gene

Itm2A is a novel type II integral membrane protein that is involved in oste o- and chondrogenic differentiation. Itm2a cDNA was originally isolated fro m a cDNA library of organ cultures from prenatal mouse mandibular condyles, by subtractive hybridization and differential screening. The Itm2a gene wa s isolated from a BALB/c liver genomic library. In total, 9.4 kb of the gen e were sequenced, of which 2649 bp are 5' flanking sequences. The Itm2a gen e contains six exons and five introns. The splice sites conform to the GT/A G rule. The 5' flanking region, which contains the presumed promoter sequen ce, lacks the common TATAA and CCAAT sequences, but contains consensus bind ing sites for various transcription factors. Several of these transcription factors are known to play a role in transcriptional regulation of cartilag e- or bone-specific genes (e.g. Cbfa1, Cart-1, MHox, HES-1, and CIIS1). Itm 2a was mapped to mouse chromosome position XA2-XA3 by fluorescent in situ h ybridization (FISH) analysis. The human homolog, ITM2A, was mapped to chrom osome position Xq13.3-Xq21.2.