The biosphere's great carbonate deposits, from caliche soils to deep-s
ea carbonate oozes, precipitate largely as by-products of autotrophic
nutrient acquisition physiologies. Protons constitute the critical lin
k: Calcification generates protons, which plants and photosynthetic sy
mbioses use to assimilate bicarbonate and nutrients. A calcium ATPase-
based ''trans'' mechanism underlies most biological calcification. Thi
s permits high calcium carbonate supersaturations and rapid carbonate
precipitation. The competitive advantages of calcification become espe
cially apparent in light and nutrient-deficient alkaline environments.
Calcareous plants often dominate the lower euphotic zone in both the
benthos and the plankton. Geographically and seasonally, massive calci
fication concentrates in nutrient-deficient environments including alk
aline soils, coral reefs, cyanobacterial mats and coccolithophorid blo
oms. Structural and defensive uses for calcareous skeletons are someti
mes overrated.