Spectroscopic investigation of phenolic groups ionization in the vipoxin neurotoxic phospholipase A(2): comparison with the X-ray structure in the region of the tyrosyl residues
Dn. Georgieva et al., Spectroscopic investigation of phenolic groups ionization in the vipoxin neurotoxic phospholipase A(2): comparison with the X-ray structure in the region of the tyrosyl residues, SPECT ACT A, 55(1), 1999, pp. 239-244
Citations number
14
Categorie Soggetti
Spectroscopy /Instrumentation/Analytical Sciences
Journal title
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY
The neurotoxin vipoxin is the major lethal component of the venom of Vipera
ammodites meridionalis, the most toxic snake in Europe. It is a complex be
tween a toxic phospholipase A(2) (PLA(2)) and a non-toxic protein inhibitor
(Inh). Tyrosyl residues are involved in the catalytic site (Tyr 52 and 73)
and in the substrate binding (Tyr 22). Spectroscopic studies demonstrated
differences in the ionization behavior of the various phenolic hydroxyl gro
ups in the toxic PLA(2). The tyrosyl side chains of the enzyme can be class
ified into three groups: (a) three phenolic hydroxyls are accessible to the
solvent and titrate normally, with a pK(eff) = 10.45; (b) three residues a
re partially 'buried' and participate in hydrogen bonds with neighboring fu
nctional groups. They titrate anomalously with a pK(eff) = 12.17; (c) two t
yrosines with a pK(eff) = 13.23 are deeply 'buried' in the hydrophobic inte
rior of PLA(2). They became accessible to the titrating agent only after al
kaline denaturation of the protein molecule. The spectroscopic data are rel
ated to the X-ray structure of the vipoxin PLA(2). The refined model was in
vestigated in the region of the tyrosyl side chains. The accessible surface
area of each tyrosyl residue and each phenolic hydroxyl group was calculat
ed. A good correlation between the spectrophotometric and the crystallograp
hic data was observed. The ionization behavior of the phenolic groups is ex
plained by peculiarities of the protein three-dimensional structure and the
participation of tyrosines in the catalytic site hydrogen bond network. At
tempts are made to assign the calculated pK(eff) values to individual resid
ues. The high degree of 'exposure' on the protein surface of Tyr 22 and 75
is probably important for their function as parts of the substrate binding
and pharmacological sites. (C) 1999 Elsevier Science B.V. All rights reserv
ed.