The standard map of the giant polytene chromosome of Drosophila ruberrima,
one of the members of the immigrans species subgroup of the immigrans speci
es group, is constructed according to the primitive gene arrangement or sta
ndard sequence (ST) for each chromosome. A pure line with homozygous chromo
somes was established. Chromosomal inversions can be identified easily by c
rossing a male fly with the pure line and checking the F-1 with the aid of
this standard map. Inversion polymorphism, both kinds and frequencies, of t
his species is high. The Taiwan population is at Hardy-Weinberg equilibrium
, but the Yunnan population shows an excess of homozygotes which is probabl
y affected by natural selection. The geographic pattern of chromosomal inve
rsion polymorphism in natural populations reveals that the marginal island
population, Taiwan, is less variable than the central mainland population,
Yunnan, mainland China. Little genetic differentiation among subpopulations
within Taiwan indicates that extensive gene flow exists. In contrast, mode
rate genetic differentiation was observed between the Taiwan and Yunnan pop
ulations.