The temperate mycobacteriophage L5 integrates site specifically into the ge
nomes of Mycobacterium smegmatis, Mycobactrium tuberculosis, and Mycobacter
ium bovis bacillus Calmette-Guerin. This integrative recombination event oc
curs between the phage L5 attP site and the mycobacterial attB site and req
uires the phage-encoded integrase and mycobacterial-encoded integration hos
t factor mIHF, Here we show that attP, Int-L5, and mIHF assemble into a rec
ombinationally active complex, the intasome, which is capable of attB captu
re and formation of products. The arm-type integrase binding sites within a
ttP play specialized roles in the formation of specific protein-DNA archite
ctures; the intasome is constructed by the formation of intramolecular inte
grase bridges between one pair of sites, P4-P5, and the attP core, while an
additional pair of sites, P1-P2, is required for interaction with attB.