The Enhanced Microbial Genomes Library

Citation
G. Perriere et al., The Enhanced Microbial Genomes Library, NUCL ACID R, 27(1), 1999, pp. 63-65
Citations number
20
Categorie Soggetti
Biochemistry & Biophysics
Journal title
NUCLEIC ACIDS RESEARCH
ISSN journal
03051048 → ACNP
Volume
27
Issue
1
Year of publication
1999
Pages
63 - 65
Database
ISI
SICI code
0305-1048(19990101)27:1<63:TEMGL>2.0.ZU;2-4
Abstract
Since the obtention of the complete sequence of Haemophilus influenzae Rd i n 1995, the number of bacterial genomes entirely sequenced has regularly in creased. A problem is that the quality of the annotations of these very lar ge sequences is usually lower than those of the shorter entries encountered in the repository collections, Moreover, classical sequence database manag ement systems have difficulties in handling entries of that size. In this c ontext, we have decided to build the Enhanced Microbial Genomes Library (EM GLib) in which these two problems are alleviated. This library contains all the complete genomes from bacteria already sequenced and the yeast genome in GenBank format. The annotations are improved by the introduction of data on codon usage, gene orientation on the chromosome and gene families. It i s possible to access EMGLib through two database systems set up on World Wi de Web servers: the PBIL server at http://pbil.univ-lyon1.fr/emglib/emglib. html and the MICADO server at http://locus.jouy.inra.fr/micado.