Update of the human MitBASE database

Citation
M. Attimonelli et al., Update of the human MitBASE database, NUCL ACID R, 27(1), 1999, pp. 143-146
Citations number
19
Categorie Soggetti
Biochemistry & Biophysics
Journal title
NUCLEIC ACIDS RESEARCH
ISSN journal
03051048 → ACNP
Volume
27
Issue
1
Year of publication
1999
Pages
143 - 146
Database
ISI
SICI code
0305-1048(19990101)27:1<143:UOTHMD>2.0.ZU;2-8
Abstract
Human MitBASE is a database collecting human mtDNA variants. This database is part of a greater mitochondrial genome database (MitBASE) funded within the EU Biotech Program. The present paper reports the recent improvements i n data structure, data quality and data quantity. As far as the database st ructure is concerned it is now fully designed and implemented. Based on the previously described structure some changes have been made to optimise bot h data input and data quality. Cross-references with other bio-databases (E MBL, OMIM, MEDLINE) have been implemented. Human MitBASE data can be querie d with the MitBASE Simple Query System (http://www.ebi.ac.uk/htbin/Mitbase/ mitbase.pl) and with SRS at the EBI under the 'Mutation' section (http://sr s.ebi.ac.uk/srs5/). At present the Human MitBASE node contains similar to 5 000 variants related to studies investigating population polymorphisms and pathologies.