Subnuclear compartmentation is postulated to play an important role in many
aspects of nuclear metabolism. To directly test an application of this mod
el to transcription factor function, we examined the subnuclear partitionin
g behavior of Pit-1, a tissue-specific, POU-class transactivator. Biochemic
al and in situ assays indicate the nuclear pool of Pit-1 is normally divide
d between two compartments: the majority being differentially soluble in de
tergent, and a significant insoluble fraction (similar to 20%) bound to the
nuclear matrix. Examination of Pit-1 deletion mutants and chimeric fusions
reveal the highly conserved 66 amino acid POU-specific domain contains a n
ecessary and sufficient nuclear matrix targeting signal. The nuclear partit
ioning behavior of several natural or engineered point mutations of Pit-1 w
as also examined. Surprisingly, the inactive point mutants were completely
matrix-bound, irrespective of their ability to bind Pit-1 specific DNA. The
se results suggest that dynamic partitioning of Pit-1 is a component of its
normal transactivator function that takes place upon the insoluble nuclear
substructure where transcription occurs. (C) 1999 Wiley-Liss, Inc.