We used the PCR-SSCP method followed by sequencing in order to assess the g
enetic variability of coding and noncoding parts of the genome of Echinococ
cus granulosus (Cestoda; Taeniidae) and to test whether or not the parasite
populations are mainly self-fertilizing. For this, we analysed a sample of
110 E. granulosus metacestode isolates collected from different geographic
al regions (Southern Brazil, Europe and Australia) and from different inter
mediate hosts (ovine, bovine, human, macropod, swine and equine). Using app
ropriate controls, we were able to identify 4 strains in that sample (sheep
, cattle, pig and horse strains). The high degree of genetic differentiatio
n between strains, but not within, and the monomorphism found in most loci
(EgAg4, EgActII, EgHbx2 and EgAg6 - non-coding - EgAgB/1 and EgND1 - coding
) indicated that they are largely selfed. On the other hand, outcrossing wa
s also shown to occur, since 5 potential hybrid genotypes between cattle an
d sheep strains were found in populations of Southern Brazil, but absent in
other geographical areas. We suggest that both processes are adaptive. The
article also reports, for the first time, the occurrence of the E. granulo
sus cattle strain in South America.