We have found a complex repeat sequence (NS22) that is highly polymorphic a
nd located within intron 45 of the ataxia-telangiectasia gene (ATM). Sequen
cing this region from various individuals demonstrated two different polymo
rphic repeating units adjacent to one another. The fact that the sequence i
s located within the ATM gene provides a unique opportunity to follow segre
gation of affected and unaffected haplotypes for prenatal diagnosis of atax
ia-telangiectasia. The high degree of polymorphism observed with this marke
r will also aid in evaluating loss of heterozygosity (LOH) across this regi
on of the genome and may prove valuable in assessing the role of the ATM ge
ne in susceptibility to cancer. Am. J. Med. Genet. 82:287-289, 1999. (C) 19
99 Wiley-Liss, Inc.