In this paper, single-molecular imaging and manipulating are presented. By
using STM, topographic features of single molecules including DNA and DNA-p
rotein complex can be visualized with subnanometer resolution in air and in
liquid. In this way, a new DNA;conformation, called parallel-stranded DNA,
has been revealed. Conformation changes of DNA enzyme during the DNA repro
duction procedure and loop structures of DNA in the process of some eukaryo
tic gene regulation have also been found. With a modified "molecular-combin
g'' technique and direct AFM imaging, DNA molecules can be aligned and then
imaged on the surface of an APS mica film. The new approach could be used
to improve present gene physical mapping.