Banana bunchy top virus (BBTV) DNA-3 to 6 have each previously been shown t
o contain one large open reading frame in the virion sense, whereas no larg
e ORF had been identified in BBTV DNA-2. RNAs transcribed from the BBTV gen
ome were mapped using northern hybridisation and 3' RACE. One mRNA was tran
scribed from each of BBTV DNA-2 to 6 and four of these mRNAs mapped to the
ORFs previously identified in BBTV DNA-3 to 6. The mRNA of BBTV DNA-2 was t
ranscribed from a virion sense ORF probably using a TATA box sequence diffe
rent to that in BBTV DNA-1, and DNA-3 to 6. This ORF encoded a 10 kDa prote
in of unknown function. The 3' untranslated region of the five mRNAs varied
from 25 nucleotides (BBTV DNA-6) to 167 nucleotides (BBTV DNA-4) and each
contained putative polyadenylation signals with associated GT rich sequence
s together with a possible termination signal (C/T/A)TGTAA conserved in all
five mRNAs.