Prediction of crystal structures of organic molecules

Citation
Dwm. Hofmann et T. Lengauer, Prediction of crystal structures of organic molecules, J MOL STRUC, 474, 1999, pp. 13-23
Citations number
27
Categorie Soggetti
Physical Chemistry/Chemical Physics
Journal title
JOURNAL OF MOLECULAR STRUCTURE
ISSN journal
00222860 → ACNP
Volume
474
Year of publication
1999
Pages
13 - 23
Database
ISI
SICI code
0022-2860(19990101)474:<13:POCSOO>2.0.ZU;2-L
Abstract
We have developed a new algorithm for crystal structure prediction that tak es a conformer of an organic molecule and produces a number of candidates o f crystal structures for this molecule, together with a score that roughly approximates the energy of the respective crystal structure. The prediction method takes steric aspects (dense packing) as well as chemical interactio ns into account. The algorithm differs from existing methods in three aspec ts. First, we analyse a single molecule rather than a collection of identic al molecules. The analysis yields candidates for symmetry operations that a re suitable for making the crystal. Each of the candidates is generated by a chemical interaction between two versions of the molecule. Second, we mod el space discretely, currently as a mesh with size 1 Angstrom. Third, the s coring function representing energy is derived statistically from known cry stal structures and tabulated. Our program FlexCryst computes a list of cry stal structures ranked according to our scoring function. The new algorithm is currently implemented for the four space groups P1, <P(1)over bar>, P2( 1), and P2(1)2(1)2(1). The three latter space groups are widespread in natu re. The algorithm computes structural models of acceptable quality and show s excellent time performance. (C) 1998 Elsevier Science B.V. All rights res erved.