Two new Mhc class I partial exon 1, intron 1, exon 2, intron 2 and partial
exon 3 DNA sequences from the New World monkey Saguinus oedipus (Saoe) are
described. These two sequences show certain Mhc-C sequence-specific changes
. The only difference between these two new sequences is a productive subst
itution at position 152 [GCG (Ala)-->GAG (Glu)]. This change occurs in a po
sition which in Mhc classical class I molecules affects the interaction bet
ween the peptide and the T-cell receptor A dendrogram with Mhc sequences fr
om different loci and different species was constructed, which clearly show
s that these two new sequences cluster closer to Mhc-C sequences than to ot
hers. These data suggest that the new sequences may be related to the Mhc-C
locus, and they have been named Mhc-Saoe-CR*01 and -CR*02. However, they s
hare only a few of the conserved residues (from gorilla to human) of Mhc-C
sequences, which suggests that the relationships with an ancestor of the Mh
c-C lineage are very distant or that these two sequences are products of co
nvergent evolution to perform a C locus related function. Furthermore, in t
he fragment of DNA sequenced, there is a loss of two invariant residues con
served in antigen-presenting molecules from reptiles to humans; thus, it is
unlikely that these two Mhc-C-like sequences have an antigen-presenting fu
nction, or even that they are two alleles of a pseudogene; however, the G C percentage (86.1%) at the third base of codons approaches that of an exp
ressed gene in Saoe. It is concluded that Mhc molecules with C-locus charac
teristics existed in primates 50 million years ago and that this does not s
upport a more recent origin of Mhc-C genes.