Al. Edelstein et N. Agmon, BROWNIAN SIMULATION OF MANY-PARTICLE BINDING TO A REVERSIBLE RECEPTORARRAY, Journal of computational physics, 132(2), 1997, pp. 260-275
The principles and practice of a many-body Brownian dynamics algorithm
of reversible binding to a static three-dimensional receptor array ar
e presented. The mixed boundary conditions at the array are compared w
ith single-particle direct propagation using a novel operator discreti
zation. The many-body aspects are checked against previous one-dimensi
onal Brownian simulations. The long-time behavior agrees with expected
analytic solutions. (C) 1997 Academic Press.