A major goal of plant biotechnology is the production of genetically engine
ered crops that express natural or foreign proteins at high levels. To enha
nce protein accumulation in transgenic plants, we developed a set of vector
s that express proteins and peptides as C-terminal translational fusions wi
th ubiquitin (UBQ). Studies of several proteins in tobacco (Nicotiana tabac
um) showed that: (a) proteins can be readily expressed in plants as UBQ fus
ions; (b) by the action of endogenous UBQ-specific proteases (Ubps), these
fusions are rapidly and precisely processed in vivo to release the fused pr
otein moieties in free forms; (c) the synthesis of a protein as a UBQ fusio
n can significantly augment its accumulation; (d) proper processing and loc
alization of a protein targeted to either the apoplast or the chloroplast i
s not affected by the N-terminal UBQ Sequence; and (e) single amino acid su
bstitutions surrounding the cleavage site can inhibit in vivo processing of
the fusion by Ubps. Noncleavable UBQ fusions of p-glucuronidase became ext
ensively modified, with additional UBQs in planta. Because multiubiquitinat
ed proteins are the preferred substrates of the 26S proteasome, noncleavabl
e fusions may be useful for decreasing protein half-life. Based on their ab
ility to augment protein accumulation and the sequence specificity of Ubps,
UBQ fusions offer a versatile way to express plant proteins.