Deletions of the short arm of chromosome 6 are relatively rare, the main fe
atures being developmental delay, craniofacial malformations, hypotonia, an
d defects of the heart and kidney, with hydroccphalus and eye abnormalities
occurring in some instances. We present the molecular cytogenetic investig
ation of six eases with 6p deletions and two cases with unbalanced transloc
ations resulting in monosomy of the distal part of 6p. The breakpoints of t
he deletions have been determined accurately by using 55 well-mapped probes
and fluorescence in situ hybridization (FISH). The cases can be grouped in
to two distinct categories: interstitial deletions within the 6p22-p24 segm
ent and terminal deletions within the 6p24-pter segment. Characteristics co
rrelating with specific regions are: short neck, clinodactyly or syndactyly
, brain, heart and kidney defects with deletions within 6p23-p24; and corne
al opacities/iris coloboma/Rieger anomaly, hypertelorism and deafness with
deletions of 6p25, The two cases with unbalanced translocations presented w
ith a Larsen-like syndrome including some characteristics of the Gp deletio
n syndrome, which can be explained by the deletion of 6p25. Such investigat
ion of cytogenetic abnormalities of 6p using FISH techniques and a defined
set of probes will allow a direct comparison of reported cases and enable m
ore accurate diagnosis as well as prognosis in patients with 6p deletions.