V. Picard et al., Topology of the stable serpin-protease complexes revealed by an autoantibody that fails to react with the monomeric conformers of antithrombin, J BIOL CHEM, 274(8), 1999, pp. 4586-4593
Solving the structure of the stable complex between a serine protease inhib
itor (serpin) and its target has been a long standing goal. We describe her
ein the characterization of a monoclonal antibody that selectively recogniz
es antithrombin in complex with either thrombin, factor Xa, or a synthetic
peptide corresponding to residues P-14 to P-9 of the serpin's reactive cent
er loop (RCL, ultimately cleaved between the P-1 and P'(1) residues), Accor
dingly, this antibody reacts with none of the monomeric conformers of antit
hrombin (native, latent, and RCL-cleaved) and does not recognize heparin-ac
tivated antithrombin or antithrombin bound to a non-catalytic mutant of thr
ombin (S195A, in which the serine of the charge stabilizing system has been
swapped for alanine). The neoepitope encompasses the motif DAFHX, located
in native antithrombin on strand 4 of beta-sheet A, which becomes strand 5
of beta-sheet A in the RCL-cleaved and latent conformers. The inferences on
the structure of the antithrombin-protease stable complex are that either
a major remodeling of antithrombin accompanies the final elaboration of the
complex or that, within the complex, at the most residues P-14 to P-9 of t
he RCL are inserted into beta-sheet A. These conclusions limit drastically
the possible locations of the defeated protease within the complex.