Lengths and nucleotide sequences of the internal spacers of nuclear ribosomal DNA in gymnosperms and pteridophytes

Citation
F. Maggini et al., Lengths and nucleotide sequences of the internal spacers of nuclear ribosomal DNA in gymnosperms and pteridophytes, PLANT SYS E, 213(3-4), 1998, pp. 199-205
Citations number
17
Categorie Soggetti
Plant Sciences
Journal title
PLANT SYSTEMATICS AND EVOLUTION
ISSN journal
03782697 → ACNP
Volume
213
Issue
3-4
Year of publication
1998
Pages
199 - 205
Database
ISI
SICI code
0378-2697(1998)213:3-4<199:LANSOT>2.0.ZU;2-R
Abstract
The nucleotide sequences of the internal transcribed spacers (ITS1 and ITS2 ) of the nuclear ribosomal DNA were analyzed in species belonging to gymnos perms and pteridophytes. The lengths of the ITSs of sixteen species of gymn osperms and seven species of pteridophytes were estimated. The gymnosperms have ITS1 regions larger than those observed in the pteridophytes and angio sperms (ca. 610-3100 bp versus 159-360 bp). On the other hand, the ITS2 reg ions appear to be of a conserved length (182-370 bp). We have determined th e complete nucleotide sequences of ITS regions from four gymnosperm species and five pteridophyte species by cloning the PCR products. Sequence analys is showed the presence of three short tandem arranged subrepeats of about 7 0 bp in the 1112 bp ITS1 of Ephedra fragilis. Pyrimidine rich (about 90%) D NA segments of 40-50 bp were observed in the ITS1 of Ginkgo biloba. A highl y conserved 16 bp long sequence known to be present in the ITS1 of the angi osperm species has been also found in the ITS1 of Cycas revoluta, Taxus bac cata and Ephedra fragilis.