2-aminopurine is a highly fluorescent isomer of adenine that can be incorpo
rated into DNA as a probe of structure, dynamics, and protein-DNA interacti
ons. Interpretation of the fluorescence of 3-aminopurine in DNA requires a
model of the electronic structure of this fluorophore in its ground and exc
ited states. To this end, electronic structures and energies of the ground
and lowest singlet excited states of 2-amino-9-methylpurine were calculated
by the multiconfiguration self-consistent field method supplemented by mul
ticonfiguration perturbation theory. The molecular geometry was optimized i
n both of these electronic states to permit investigation of both electroni
c excitation and fluorescence emission. The predicted energies and transiti
on dipoles were in good agreement with experiment. The permanent molecular
dipole of 2-amino-9-methylpurine increased upon excitation, suggesting that
both the absorption and emission spectra should shift to slightly lower en
ergies in polar solvents. The anomalous spectral shifts observed in water s
uggest that 2-aminopurine undergoes hydrogen bonding that better stabilizes
the ground state than the excited state. From the calculated electrostatic
potentials of these two states, the position at which this hydrogen bond f
orms was predicted. These results form a basis for understanding the excite
d states and possible intermolecular interactions of 2-aminopurine in DNA.