At. Petkova et al., Arginine activity in the proton-motive photocycle of bacteriorhodopsin: Solid-state NMR studies of the wild-type and D85N proteins, BIOCHEM, 38(5), 1999, pp. 1562-1572
N-15 solid-state NMR (SSNMR) spectra of guanidyl-N-15-labeled bacteriorhodo
psin (bR) show perturbation of an arginine residue upon deprotonation of th
e retinal Schiff base during the photocycle. At the epsilon position, an up
field shift of 4 ppm is observed while the eta nitrogens develop a pair of
'wing' peaks separated by 24 ppm. Proton-driven spin diffusion between the
two 'wing' peaks indicates that they arise from a single Arg residue. An un
usually asymmetric environment for this residue is indicated by comparison
with guanidyl-N-15 chemical shifts in a series of arginine model compounds.
The 'wing' peaks are tentatively assigned to Arg-82 on the basis of the SS
NMR investigations of the alkaline and neutral dark-adapted forms of the D8
5N bacteriorhodopsin mutant. Another, less asymmetric pair of eta signals,
that is not: affected by Schiff base deprotonation or D85 mutation, is tent
atively assigned to Arg-134. The results are discussed in relation to exist
ing models of bR structure and function.