Thrombin inhibitors with functionalized benzamidines as surrogates for
arginine were designed, synthesized, and characterized. Amino acid se
quence difference in the position 190 between thrombin and trypsin was
exploited in the design to enhance selectivity over trypsin. A repres
entative compound 6 showed high potency (Ki of 45.5 nM) and extremely
high specificity over trypsin (over 10,000 fold). (C) 1997 Elsevier Sc
ience Ltd.