Cystitis is caused by a relatively small number of bacterial species. To co
lonize and grow in the urinary tract, these organisms have developed and ac
quired special properties (virulence factors) that allow them to overcome t
he defences of the urinary tract, particularly clearance by urine flow. The
se virulence factors are unlikely to be required during transmission from h
ost to host, and sometimes their constitutive expression may actually be di
sadvantageous. Such factors are therefore regulated by the environment and
in a coordinate manner to ensure their most appropriate expression for the
conditions encountered. This review focuses on the biology of the urinary t
ract and the bacterial properties necessary to cause cystitis. The regulati
on of virulence factors at the different stages of the infection is conside
red, and a general model for the pathogenesis of urinary tract infection is
proposed.