In this study, thrombin interaction with the basic pancreatic trypsin inhib
itor (BPTI) was investigated in the presence of different allosteric modula
tors of thrombin, that is the C-terminal hirudin peptide 54-65 (Hh54-65), a
recombinant thrombomodulin form (TMEGF4-6) and Na+. BPTI binding to alpha-
thrombin is positively linked to Na+ Under low sodium concentration (5 mM N
a+) the BPTI affinity for alpha-thrombin was roughly threefold lower than i
n the presence of 150 mM sodium (K-i = 320 mu M vs. 100 mu M). The hirudin
fragment, which binds to the fibrinogen recognition site (FRS) of thrombin,
induced a progressive and saturable decrease (3.6-fold) of alpha-thrombin
affinity for BPTI, whereas the thrombomodulin peptide, which binds to a mor
e extended region of FRS, caused a 5.5-fold increase of the enzyme affinity
for the inhibitor. The opposite effect exerted by Hir54-65 and TMEGF4-6 wa
s also observed for BPTI interaction with zeta-thrombin, in which the amidi
c bond between W148 and T149 is cleaved. However, in this case the effect b
y Hir54-65 and TMEGF4-6, although qualitatively similar to that observed wi
th alpha-thrombin, had a smaller magnitude. Thrombin hydrolysis of Protein
C was also differently affected by Hir54-65 and TMEGF4-6 peptides. While th
e latter enhanced the Protein C activation, the former caused a reduction o
f both alpha- and S-thrombin k(cat)/K-m' for Protein C cleavage. These resu
lts showed that (a) Na+ facilitates BPTI interaction with thrombin; (b) Hir
54-65 and TMEGF4-6, though sharing in part the same binding site at the thr
ombin FRS, can affect in opposite way thrombin's interaction with BPTI and
Protein; (c) such findings along with the results obtained with zeta-thromb
in might be explained by admitting that the thermodynamic linkage between F
RS and the critical W60-loop is also controlled by ligation and/or conforma
tional state of the W148 insertion loop.