A knowledge of the effective size of a population (N-e) is important in und
erstanding its current and future evolutionary potential. Unfortunately, th
e effective size of a hierarchically structured population is not, in gener
al, equal to the sum of its parts. In particular, the inbreeding structure
has a major influence on N-e. Here I link N-e to Wright's hierarchical meas
ures of inbreeding, F-IS and F-ST, for an island-structured population (or
metapopulation) of size NT The influence of Fs, depends strongly on the deg
ree to which island productivity is regulated. In the absence of local regu
lation (the interdemic model), interdemic genetic drift reduces N-e. When s
uch drift is combined with local inbreeding under otherwise ideal condition
s, the effects of F-IS and F-ST are identical: increasing inbreeding either
within or between islands reduces N-e, with N-e = N-T/[(1 + F-IS)(1 + F-ST
) - 2F(IS)F(ST)]. However, if islands are all equally productive because of
local density regulation (the traditional island model), then N-e = N-T/[(
1 + F-IS)(1 - F-ST)] and the effect of F-ST is reversed. Under the interdem
ic model, random variation in the habitat quality land hence productivity)
of islands act to markedly decrease N-e. This variation has no effect under
the island model because, by definition, all islands are equally productiv
e. Even when no permanent island structure exists, spatial differences in h
abitat quality can significantly increase the overall variance in reproduct
ive success of both males and females and hence lower N-e. Each of these ba
sic results holds when other nonideal factors are added to the model. These
factors, deviations from a 1:1 sex ratio, greater than Poisson variance in
female reproductive success, and variation in male mating success due to p
olygynous mating systems, all act to lower N-e. The effects of male and fem
ale variance on N-e have important differences because only females affect
island productivity. Finally, it is noted that to use these relationships,
F-IS and F-ST must be estimated according to Wright's definition land corre
cted to have a zero expectation under the null model). A commonly used part
itioning (theta, theta(g)) can be biased if either island size or the numbe
r of islands is small.