Use of conventional biochemical tests and analyses of ribotype patterns for classification of micrococci isolated from dairy products

Citation
F. Irlinger et Jl. Bergere, Use of conventional biochemical tests and analyses of ribotype patterns for classification of micrococci isolated from dairy products, J DAIRY RES, 66(1), 1999, pp. 91-103
Citations number
37
Categorie Soggetti
Food Science/Nutrition
Journal title
JOURNAL OF DAIRY RESEARCH
ISSN journal
00220299 → ACNP
Volume
66
Issue
1
Year of publication
1999
Pages
91 - 103
Database
ISI
SICI code
0022-0299(199902)66:1<91:UOCBTA>2.0.ZU;2-Z
Abstract
Various methods were used to study 42 Gram-positive cocci belonging to the family of Micrococcaceae and isolated from dairy products. Only a few strai ns could be identified using the ATE 32 biochemical micromethod rapid galle ry system (API).; All strains were subjected to conventional biochemical te sts. The results were then analysed by a numerical method using the Sokal-M ichener similarity coefficient. The 42 strains were distributed into 10 clu sters at the Euclidean distance of 3.2. Most (75 %) of the isolates were id entified at the species level, but Micrococcus luteus could not be differen tiated from Mc. lylae within the,Micrococcus genus. An identification metho d based on the analysis of ribotype patterns was then applied to the isolat es and these were compared with the patterns of collection strains. Cellula r DNA was cleared by the restriction enzymes SacI and KpnI and probed with the perosidase-labelled 16S + 23S rRNA of Escherichia coli. Ribotype patter ns were analysed using a Dice coefficient and the unweighted pair group met hod using arithmetic averages, making dendrogram construction possible. Of the strains investigated, > 84 % were characterized to the species level. T he remaining strains were found to belong to the Arthrobacter group or were atypical,Micrococcus species. Of the isolates, 52% belonged to Micrococcus luteus, 17 % were identified as Kocuria varians and 7 % were assigned to t he Brachybacterium genus.