The origin of contrast in atomic force microscopy (AFM) lies in the probe's
response to Forces between itself and the sample. These forces most common
ly result from changes in height as the tip is scanned over the surface, bu
t can also originate in properties inherent in the sample. These have been
exploited as further means of contrast and have spawned an array of similar
imaging techniques, such as chemical force microscopy, magnetic force micr
oscopy, and frictional force microscopy. All of these techniques use AFM as
an extremely sensitive gauge to map forces at discrete sites on the surfac
e. A natural extension of this approach is to map forces in an array, in or
der to create a force map; AFM. can be used in aqueous or fluid environment
s, thus allowing the exploration of forces in biological systems under phys
iologically relevant conditions. By immobilizing one half of an interacting
pair of proteins onto the tip and the other half onto the substrate, it is
possible to investigate the electrostatic and hydrophobic interactions bet
ween them. We employed these techniques to examine the interaction between
a pair of proteins of known affinity that are involved in exocytosis (NSF a
nd or-SNAP) and separately to demonstrate how two-dimensional force mapping
can be applied to the nuclear envelope to identify nuclear pore complexes,
(C) 1999 Wiley-Liss. Inc.