Human immunodeficiency virus (HIV-1) associated immune deficiency has the c
haracteristics of chronic graft versus host disease (GVHD) caused by human
leukocyte antigen (HLA) class 2 incompatibility. The envelope glycoprotein
fragment TKAKRRVVEREKR mimics HLA class 1 C molecules serologically, and al
so mimics an immune regulatory T cell epitope, in the region of amino acids
67 to 71, within the HLA DR beta chain. This beta chain alloepitopic regio
n (between amino acids 67 to 80) furnishes peptides predicted to bind optim
ally to HLA class 1 B alleles. The hypothesis predicts that viral parameter
s, such as viral load, and clinical parameters, such as rate of progress to
acquired immune deficiency syndrome (AIDS) and severity of the associated
immune deficient state, are linked to the HLA B and HLA DR beta chain haplo
type in infected patients. Immune suppression is caused by HLA class 1 B re
stricted CD8+ T cells which normally regulate HLA class 2 DR restricted ant
igen specific responses. The hypothesis further predicts the severity of im
mune deficiency to be linked to those HLA DR beta chain allotypes which exp
ress the aminoacid glutamine (Q) in position 70.