R. Gilmanshin et al., FAST EVENTS IN PROTEIN-FOLDING - RELAXATION DYNAMICS AND STRUCTURE OFTHE I-FORM OF APOMYOGLOBIN, Biochemistry, 36(48), 1997, pp. 15006-15012
The fast relaxation dynamics of the acid destabilized I form of apomyo
globin (pH 3, 0.15 M NaCl: apoMb-I) following a laser-induced tempera
ture-jump have been probed using time-resolved infrared spectroscopy.
Only a fast, single exponential phase is observed (bleach centered at
v = 1633 cm(-1) and transient absorbance at 1666 cm(-1)) with relaxati
on times of 38 ns at 30 degrees C and 36 ns at 57 degrees C; no additi
onal slow (microsecond) phase is observed as previously found in the n
ative form of apomyoglobin, Folding times of approximately 66 ns are d
erived from the observed rates based on a simple two-state model. The
equilibrium melting of the 1633 cm(-1) component shows noncooperative
linear behavior over the temperature range studied (10-60 degrees C).
The low amide I' frequency, the fast relaxation dynamics, and the nonc
ooperative melting behavior are characteristic of isolated solvated he
lix. The analysis of the amide-I' band reveals another major component
at 1650 cm(-1) assigned to native-like structure stabilized by tertia
ry contacts involving the AGH core, which does not show dynamic or sta
tic melting under our conditions. ApoMb-I has generally been taken to
be a ''molten globule'' species, The present results indicate a hetero
geneous structure consisting of separate regions of native-like unit(s
), solvated helices, and disordered coil, excluding a homogeneous molt
en globule as a model for apoMb-I. From the current studies and other
results, a detailed model of the folding of apomyoglobin is presented.