Mm. Woolfson et al., NEW TECHNIQUES FOR APPLYING ANOMALOUS-SCATTERING AND ISOMORPHOUS-REPLACEMENT DATA INCORPORATED IN ANOMIR - A GENERAL APPLICATION PACKAGE, Acta crystallographica. Section D, Biological crystallography, 53, 1997, pp. 673-681
A computer package ANOMIR is described which can derive phases from an
omalous scattering and/or isomorphous-replacement data in any combinat
ion. For anomalous scattering it incorporates five methods of applying
one-wavelength data and three methods for multiple-wavelength data in
cluding SPIN, reported here for the first time. In addition there are
three procedures for multiple-wavelength data - the first modifying da
ta for different wavelengths to make them mutually consistent, the sec
ond estimating the contributions of the anomalous scatterers alone and
the third which rinds anomalous differences. For single isomorphous r
eplacement or one-wavelength anomalous scattering the phase ambiguity
can be resolved by the direct method [Fan, Han, Qian & Yao (1984). Act
a Cryst. A40, 489-495] but for multiple isomorphous replacement the ma
in method is an adaptation of the probability-curve method [Blow & Cri
ck (1959). Acta Cryst. 12, 794-802]. A new statistical method is descr
ibed for estimating the standard error in measuring magnitudes which i
s independent of having subsets of centric reflections. A method is de
scribed whereby the weights associated with phase estimates are used t
o generate probability curves, through which it is possible to combine
estimates from different methods and to produce a 'best phase' and fi
gure-of-merit for every reflection. ANOMIR procedures are also availab
le for handling combinations of one-wavelength anomalous scattering wi
th single-or multiple-isomorphous replacement. A final process, which
is always beneficial, is a single parallel application of the tangent
formula. The ANOMIR package has been designed for easy use and is cont
rolled throughout by KEYWORDS. Results for several structures are give
n and compared with those found from the MLPHARE program in the CCP4 p
ackage.