The quantitative determination of proteins in picoliter-volume vials i
s described. The assay is based on the bioluminescence of the photopro
tein aequorin along with photon-counting detection. Using this approac
h, avidin can be detected at femtomole levels by taking advantage of i
ts inhibitory effect on the bioluminescence signal generated by biotin
ylated recombinant aequorin. The picoliter vials were fabricated on gl
ass substrates using a laser ablation technique. Parameters that affec
t the reproducibility of the assay such as the fabrication and calibra
tion of the pipets, the fabrication of the vials, and the composition
of the assay solutions were studied.