M. Remelli et al., SYNTHESIS OF SPINACINE AND SPINACINE DERIVATIVES - CRYSTAL AND MOLECULAR-STRUCTURES OF N-PI-HYDROXYMETHYL SPINACINE AND N-ALPHA-METHYL SPINACEAMINE, Journal of chemical crystallography, 27(9), 1997, pp. 507-513
The natural amino acid L-Spinacine -tetrahydro-1H-imidazo[4,5-c]pyridi
ne-6-carboxylic acid) has been synthesized following a new pathway whi
ch gives a chemically and optically pure product with an excellent yie
ld. The crystal structures of a synthetic intermediate, N-pi-hydroxyme
thyl-spinacine, and a spinacine derivative, N-alpha-methyl-spinaceamin
e, have been investigated through X-ray diffraction: Spi(pi MeOH) . H2
O, monoclinic P2(1), a = 8.571(1), b = 6.682(1), c = 8.588(1)Angstrom,
and beta = 94.67(1)degrees. Spm(alpha Me) . 2HCl . H2O, triclinic P (
1) over bar, a = 7.492(4), b = 10.799(3), c = 7.040(2) Angstrom, alpha
= 91.88(2), beta = 98.36(3) and gamma = 73.34(3)degrees. Spi(pi MeOH)
crystallizes with a water molecule and displays a zwitterionic charac
ter. The carboxylate group is in equatorial position and forms a short
electrostatic interaction of 2.618(2) Angstrom between one of its oxy
gens and the protonated nitrogen of the tetrahydropyridine ring. The c
rystal packing is assured by strong O-H---O, O-H---N, N-H---N intermol
ecular hydrogen bonds and C--H---O close contacts. The biprotonated co
mpounds Spm(alpha Me) crystallizes with two Cl- anions and a water mol
ecule. The positive charge on the imidazole ring is delocalized on the
conjugated moiety N=C-N. The crystal is built up by clusters formed b
y two biprotonated Spm(alpha Me) molecules, four Cl- anions and two wa
ter molecules linked together by hydrogen bonds.