The Cre-recombinase of bacteriophage P1 catalyses site-specific recomb
ination between DNA fragments containing loxP sites. Targeting of pred
efined genomic loci can be achieved by Cre-mediated linkage of a promo
terless resistance marker gene to a flexed promoter pre-existing in th
e genome. In order to avoid the introduction of plasmid sequences into
the host genome, we have constructed a series of plasmids in which th
e DNA segment to be integrated is flanked by two loxP sites. We show h
ere that this flexed targeting fragment is reliably and effectively se
parated from the vector backbone and integrated into genomic loxP site
s by Cre-mediated site-specific recombination in mammalian cells. We a
lso demonstrate that by using this approach two convergent, promoterle
ss coding regions can simultaneously be linked to two independent prom
oter elements at a pre-existing genomic loxP site. This methodology wi
ll be particularly useful for genomic targeting experiments in transge
nic animals. (C) 1997 Elsevier Science B.V.