U. Norinder et al., A 3D-QSAR STUDY OF ANALOGS OF (Z)-5-DECENYL ACETATE, A PHEROMONE COMPONENT OF THE TURNIP MOTH, AGROTIS-SEGETUM, Journal of chemical ecology, 23(12), 1997, pp. 2917-2934
The methodology of three-dimensional quantitative structure-activity r
elationships (3D-QSAR) has been employed to develop a quantitative mod
el for the relationship between single-cell activities for a large set
of analogs of (Z)-5-decenyl acetate, a pheromone component of the tur
nip moth, Agrotis segetum, and the structural characteristics of the a
nalogs. The method of partial least squares (PLS) projections to laten
t structures has been used to delineate the relationships between meas
ured activities and chemical structures. The training set includes 42
compounds, and a test set of seven molecules has been employed to asse
ss the predictivity of the model. The model derived is able to calcula
te the activities of the seven test compounds with an average unsigned
error of 0.3, close to the experimental error. Contour maps of regres
sion-like coefficients from transformed PLS components display electro
nic and nonbonded features of high importance for the observed variati
on in the activities of compounds in the training set. The contours fo
r the nonbonded (van der Waals) field support previous conclusions tha
t the interaction between the pheromone component and its receptor is
characterized by a high steric complementarity.