The inactive X chromosome differs from the active X in a number of way
s; some of these, such as allocyclic replication and altered histone a
cetylation, are associated with all types of epigenetic silencing, whe
reas others, such as DNA methylation, are of more restricted use. Thes
e features are acquired progressively by the inactive X after onset of
initiation. Initiation of X-inactivation is controlled by the X-inact
ivation center (Xic) and influenced by the X chromosome controlling el
ement (Xce), which causes primary nonrandom X-inactivation. Other exam
ples of nonrandom X-inactivation are also presented in this review. Th
e definition of a major role for Xist, a noncoding RNA, in X-inactivat
ion has enabled investigation of the mechanism leading to establishmen
t of the heterochromatinized X-chromosome and also of the interactions
between X-inactivation and imprinting as well as between X-inactivati
on and developmental processes in the early embryo.